Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs5744038 chr11:1295436 T/C 6.66E-16 518 41.27 33.97 1.97 KM Plot
KIRC rs5777813 chr1:152490039 CT/C 5.49E-5 523 34.83 44.3 37.9 KM Plot
KIRC rs57942850 chr11:34771758 G/GA 1.53E-7 522 41.27 26.27 3.3 KM Plot
KIRC rs58432165 chr2:168097701 G/A 4.09E-8 524 40 32.42 3.37 KM Plot
KIRC rs58771466 chr11:1292267 A/G 6.66E-16 517 41.73 33.95 1.97 KM Plot
KIRC rs5882134 chr7:7755644 A/AT 3.58E-5 521 38.47 49.45 5.47 KM Plot
KIRC rs59115636 chr11:34794686 A/G 1.49E-7 522 40 38.47 3.3 KM Plot
KIRC rs59493792 chr6:2438056 C/T 1.65E-7 516 40 36.48 5.47 KM Plot
KIRC rs59742125 chr11:1285955 T/C 6.66E-16 517 41.73 33.95 1.97 KM Plot
KIRC rs60100577 chr6:50816134 C/T 5.17E-6 519 40.5 40.3 15.3 KM Plot
KIRC rs60113722 chr7:46586215 T/A 3.89E-5 522 47.75 33.75 27.48 KM Plot
KIRC rs60181254 chr2:67538173 C/T 1.9E-7 525 40.57 37.7 2.03 KM Plot
KIRC rs60326603 chr1:220489962 T/C 5.93E-5 523 41.27 32.05 11.47 KM Plot
KIRC rs60480200 chr2:2610318 C/T 3.8E-5 527 39.85 41.27 8.35 KM Plot
KIRC rs60503414 chr2:6620522 C/A 1.85E-5 514 38.52 45.77 10.97 KM Plot